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Cleanup

enhancementNew feature or requestNew feature or request

Status: Open.

#123 In jaleezyy/covid-19-signal;

· jaleezyy opened on Oct 6, 2021

Support IonTorrent .bam input

Status: Open.

#122 In jaleezyy/covid-19-signal;

· fmaguire opened on Jul 19, 2021

Galaxy workflow?

Status: Open.

#121 In jaleezyy/covid-19-signal;

· domenico-simone opened on Jul 7, 2021

Incorporate scorpio calls into report

Status: Open.

#120 In jaleezyy/covid-19-signal;

· fmaguire opened on Jun 8, 2021

Convert rules for wrapped tools to official wrapper

Status: Open.

#117 In jaleezyy/covid-19-signal;

· fmaguire opened on May 19, 2021

Fix containerization

Status: Open.

#116 In jaleezyy/covid-19-signal;

· fmaguire opened on May 19, 2021

Add Continuous Integration tests and linting

Status: Open.

#115 In jaleezyy/covid-19-signal;

· fmaguire opened on May 19, 2021

Revisit output layout

Status: Open.

#114 In jaleezyy/covid-19-signal;

· fmaguire opened on May 18, 2021

Switch remaining default output to freebayes vs iVar

Status: Open.

#112 In jaleezyy/covid-19-signal;

· fmaguire opened on May 13, 2021

Merge read pairs

Status: Open.

#93 In jaleezyy/covid-19-signal;

· atduggan opened on Aug 17, 2020

Release only docker build/push

enhancementNew feature or requestNew feature or request

Status: Open.

#88 In jaleezyy/covid-19-signal;

· fmaguire opened on Jun 29, 2020

Output details on README

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#47 In jaleezyy/covid-19-signal;

· agmcarthur opened on May 13, 2020