Issues

• repo-identity reports "no brain yet" for every remote-keyed repository

  entireio/entire-brain#413 · Filter by author mongojy opened on Oct 19, 2026

• History index and conversation stay empty — 0 records, 0 exchanges — even on a fresh repo

  entireio/entire-brain#412 · Filter by author mongojy opened on Oct 19, 2026

• facts verify: freshly distilled facts are stale — exported transcript (v:1) never matches the native checkpoint transcript

  entireio/entire-brain#411 · Filter by author mongojy opened on Oct 19, 2026

• Agents miss facts Brain already retrieved: brief --json puts status before facts/history; query returns no facts for natural questions

  bug
  entireio/entire-brain#335 · Filter by author karthik-rameshkumar opened on Oct 6, 2026
  2

• Brain can use Ollama on another machine and picks Ollama automatically, instead of quietly using a cloud agent

  entireio/entire-brain#328 · Filter by author peyton-alt opened on Oct 2, 2026

• Brain keeps indexing new commits while the worktree has uncommitted changes

  entireio/entire-brain#327 · Filter by author peyton-alt opened on Oct 2, 2026

• brain brief stops locking the git index, which was making other agents' git commands fail

  entireio/entire-brain#326 · Filter by author peyton-alt opened on Oct 2, 2026

• status --json takes ~1 minute once facts exist, which rules it out for hooks

  entireio/entire-brain#325 · Filter by author leine4550 opened on Oct 2, 2026

• facts promote: keep-both queues a confidence-0 supersede proposal for nearly every fact pair, flagging all target facts as contradictions

  entireio/entire-brain#324 · Filter by author leine4550 opened on Oct 2, 2026

• init-agents: generated guide recommends entire graph query, which entire-graph v0.4.0 does not have

  entireio/entire-brain#323 · Filter by author leine4550 opened on Oct 2, 2026

• distill: --agent claude-code fails on Windows with "The command line is too long"

  entireio/entire-brain#322 · Filter by author leine4550 opened on Oct 2, 2026

• BrainMark: isolate per-arm backend state and fail closed on sandbox setup errors

  entireio/entire-brain#201 · Filter by author ashtom opened on Sep 11, 2026