E2E tests, quick

Workflow runs for E2E tests, quick

• Peptide outlier guard and decoupled deff gate

  completed successfully:
  E2E tests, quick#208:Pull request#149openedbyammarcsj
  revision-v5-aggregation-fixes

  Oct 1, 20264m 49s
  More actions for workflow run 208

• [VERSION] Bump version to 0.5.1-dev0 (merge after release)

  failed:
  E2E tests, quick#207:Pull request#148openedbygithub-actions[bot]Bot
  bump_minor_from_0.4.1-dev0-prepare-next-version

  Aug 1, 20264m 41s
  More actions for workflow run 207

• [VERSION] Bump version to 0.5.0

  completed successfully:
  E2E tests, quick#206:Pull request#147openedbygithub-actions[bot]Bot
  bump_minor_from_0.4.1-dev0

  Aug 1, 20265m 50s
  More actions for workflow run 206

• Add residual design-effect correction and aggregation calibration parameters

  completed successfully:
  E2E tests, quick#205:Pull request#146openedbyammarcsj
  add_residual_deff_correction

  Jul 31, 20265m 16s
  More actions for workflow run 205

• Fix release installer packaging

  completed successfully:
  E2E tests, quick#204:Pull request#143openedbyammarcsj
  fix-installer-packaging-downloads

  May 25, 20264m 37s
  More actions for workflow run 204

• Fix failing CI tests

  completed successfully:
  E2E tests, quick#203:Pull request#140openedbyammarcsj
  fix_failing_ci_tests

  May 25, 20264m 44s
  More actions for workflow run 203

• Merge stacked feature branches into main

  completed successfully:
  E2E tests, quick#202:Pull request#139synchronizebyammarcsj
  add_quant_reader_and_table_updates

  May 25, 20264m 26s
  More actions for workflow run 202

• Mark pandas<3 as tolerated version pin in loose requirements

  completed successfully:
  E2E tests, quick#201:Pull request#138openedbyammarcsj
  fix_pandas_loose_requirement

  May 25, 20264m 26s
  More actions for workflow run 201

• Fix counting statistics with shorter trees

  completed successfully:
  E2E tests, quick#200:Pull request#125synchronizebyammarcsj
  fix_counting_stats_w_shorter_trees

  May 25, 20266m 50s
  More actions for workflow run 200

• Fix counting statistics with shorter trees

  completed successfully:
  E2E tests, quick#199:Pull request#125synchronizebyammarcsj
  fix_counting_stats_w_shorter_trees

  May 25, 20264m 9s
  More actions for workflow run 199

• Restore notebook plotting functions removed by dead code cleanup

  completed successfully:
  E2E tests, quick#198:Pull request#137openedbyammarcsj
  fix_notebook_plotting_functions

  May 25, 20264m 48s
  More actions for workflow run 198

• Wire new aggregation features into cluster and pipeline

  failed:
  E2E tests, quick#197:Pull request#135synchronizebyammarcsj
  wire_new_aggregation_features

  May 25, 20265m 19s
  More actions for workflow run 197

• Add documentation to residual_decorrelation module

  completed successfully:
  E2E tests, quick#196:Pull request#136openedbyammarcsj
  document_residual_decorrelation

  May 25, 20264m 39s
  More actions for workflow run 196

• Wire new aggregation features into cluster and pipeline

  completed successfully:
  E2E tests, quick#195:Pull request#135openedbyammarcsj
  wire_new_aggregation_features

  May 25, 20264m 31s
  More actions for workflow run 195

• Add residual decorrelation module

  failed:
  E2E tests, quick#194:Pull request#134openedbyammarcsj
  add_residual_decorrelation

  May 25, 20262m 26s
  More actions for workflow run 194

• Add ICC correction module

  failed:
  E2E tests, quick#193:Pull request#133openedbyammarcsj
  add_icc_correction

  May 25, 20262m 22s
  More actions for workflow run 193

• Add intensity summarization module

  failed:
  E2E tests, quick#192:Pull request#132openedbyammarcsj
  add_intensity_summarization

  May 25, 20262m 20s
  More actions for workflow run 192

• Add variance predictor module

  failed:
  E2E tests, quick#191:Pull request#131openedbyammarcsj
  add_variance_predictor

  May 25, 20262m 21s
  More actions for workflow run 191

• Add split ion backgrounds and new z-aggregation modes

  failed:
  E2E tests, quick#190:Pull request#130openedbyammarcsj
  add_background_split_and_z_aggregation

  May 25, 20262m 24s
  More actions for workflow run 190

• Update quant reader config and table handling

  completed successfully:
  E2E tests, quick#189:Pull request#129openedbyammarcsj
  add_quant_reader_and_table_updates

  May 25, 20264m 37s
  More actions for workflow run 189

• Add graphviz pure-Python fallback layout for treeviz

  completed successfully:
  E2E tests, quick#188:Pull request#128openedbyammarcsj
  add_treeviz_graphviz_fallback

  May 25, 20264m 30s
  More actions for workflow run 188

• Remove orphan functions and dead plotting/utility code

  completed successfully:
  E2E tests, quick#187:Pull request#127openedbyammarcsj
  remove_dead_code

  May 25, 20264m 29s
  More actions for workflow run 187

• Fix counting statistics with shorter trees

  failed:
  E2E tests, quick#186:Pull request#125openedbyammarcsj
  fix_counting_stats_w_shorter_trees

  Feb 13, 20264m 26s
  More actions for workflow run 186

• make alphamap optional and update installation instructions

  completed successfully:
  E2E tests, quick#185:Pull request#121synchronizebymschwoer
  make-alphamap-optional

  Jan 28, 20264m 42s
  More actions for workflow run 185

• make alphamap optional and update installation instructions

  completed successfully:
  E2E tests, quick#184:Pull request#121synchronizebymschwoer
  make-alphamap-optional

  Jan 28, 20264m 30s
  More actions for workflow run 184