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Fix link in README for vcf_reformatter.py #15

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Fix link in README for vcf_reformatter.py #15

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -66,7 +66,7 @@ In this repository you will find useful resources related to the HIVE platfrom.
* Command line input: `python quote_csv.py -f input.csv -o output.csv`
* Input file: any csv file.

## 14.[vcf_reformatter.py](https://github.com/GW-HIVE/scripts/blob/main/python/VCFReformatter.py)
## 14.[vcf_reformatter.py](https://github.com/GW-HIVE/scripts/blob/main/python/vcf_reformatter.py)
* Function: This script will convert a VCF file generated by HIVE Heptagon into the [VCF standard](https://samtools.github.io/hts-specs/VCFv4.2.pdf) (PDF) to be compatible with other applications. Uses [csv](https://github.com/python/cpython/blob/3.9/Lib/csv.py) and [re](https://github.com/python/cpython/blob/3.9/Lib/re.py) modules.
* Command line input: NA (written in an IDE, so input file is hard coded (on line 29). Would have to be rewritten for command line args if meant to be executed at CLI).
* Intput file: a .vcf file generated by HIVE Heptagon.
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