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Add docs - #53

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Add docs#53
kwabenantim wants to merge 1 commit into
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45-add-documentation

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@kwabenantim

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Fixes #45

Expand the README into a full documentation site (Sphinx + Furo + MyST),
built and deployed to GitHub Pages, addressing issue #45.

Content pages cover: installation, first steps, command-line options,
using generated code in Chaste user projects, the anatomy of the generated
code, SBML feature support (with SBML Test Suite results), and worked
tutorials for a simple SRN model (Goldbeter 1991) and a complex cell-cycle
model with events (Tyson-Novak 2001).

Also:
- Add a docs CI workflow (build on every PR with -W, deploy from develop).
- Add a `docs` extra and tidy the project metadata in pyproject.toml
  (keywords, classifiers, documentation/issues URLs; drop redundant isort
  settings already implied by profile = black and align its line length).
- Link the docs site and add a build badge in the README.
- Ignore doc/_build/.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012Fn8DBEftxqCRTNVinuLCh
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codecov Bot commented Aug 20, 2026

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 100.00%. Comparing base (df39e99) to head (81ba471).

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Add Documentation

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