Hello
Thank you very much for your time.
I'm ruining MitoHPC. The first part of the analysis runs fine. But I end up getting this error when using haplogrep3.jar, as shown below
I would really appreciate your help.
java -Xms3G -Xmx3G -XX:ParallelGCThreads=1 -jar /share1/home/file/file2/pkgs/MitoHPC/java//haplogrep3.jar classify --in /share1/home//share1/home/file/file2/pkgs/MitoHPC/out//sample_A/sample_A.mutect2.vcf --format vcf --out /share1/home/share1/home/file/file2/pkgs/MitoHPC/out//sample_A/sample_A.mutect2.haplogroup
Haplogrep 3 3.2.2
(c) 2022-2024 Sebastian Schönherr, Hansi Weissensteiner, Lukas Forer
Loading configuration from file 'haplogrep3.yaml' failed.
raw.githubusercontent.com
Hello
Thank you very much for your time.
I'm ruining MitoHPC. The first part of the analysis runs fine. But I end up getting this error when using haplogrep3.jar, as shown below
I would really appreciate your help.
java -Xms3G -Xmx3G -XX:ParallelGCThreads=1 -jar /share1/home/file/file2/pkgs/MitoHPC/java//haplogrep3.jar classify --in /share1/home//share1/home/file/file2/pkgs/MitoHPC/out//sample_A/sample_A.mutect2.vcf --format vcf --out /share1/home/share1/home/file/file2/pkgs/MitoHPC/out//sample_A/sample_A.mutect2.haplogroup
Haplogrep 3 3.2.2
(c) 2022-2024 Sebastian Schönherr, Hansi Weissensteiner, Lukas Forer
Loading configuration from file 'haplogrep3.yaml' failed.
raw.githubusercontent.com