glmnet/NAMESPACE at master · cran/glmnet · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
# Generated by roxygen2: do not edit by hand

S3method("[",stratifySurv)
S3method(buildPredmat,array)
S3method(buildPredmat,coxnetlist)
S3method(buildPredmat,default)
S3method(buildPredmat,glmnetfitlist)
S3method(buildPredmat,lognetlist)
S3method(buildPredmat,mrelnetlist)
S3method(buildPredmat,multnetlist)
S3method(coef,cv.glmnet)
S3method(coef,cv.relaxed)
S3method(coef,glmnet)
S3method(coef,relaxed)
S3method(deviance,glmnet)
S3method(family,cv.glmnet)
S3method(family,glmnet)
S3method(family,glmnetfit)
S3method(family,relaxed)
S3method(plot,cv.glmnet)
S3method(plot,cv.relaxed)
S3method(plot,glmnet)
S3method(plot,mrelnet)
S3method(plot,multnet)
S3method(plot,relaxed)
S3method(predict,coxnet)
S3method(predict,cv.glmnet)
S3method(predict,cv.relaxed)
S3method(predict,elnet)
S3method(predict,fishnet)
S3method(predict,glmnet)
S3method(predict,glmnetfit)
S3method(predict,lognet)
S3method(predict,mrelnet)
S3method(predict,multnet)
S3method(predict,relaxed)
S3method(print,bigGlm)
S3method(print,confusion.table)
S3method(print,cv.glmnet)
S3method(print,cv.relaxed)
S3method(print,glmnet)
S3method(print,relaxed)
S3method(survfit,coxnet)
S3method(survfit,cv.glmnet)
export(Cindex)
export(assess.glmnet)
export(bigGlm)
export(buildPredmat)
export(coef.glmnet)
export(coef.relaxed)
export(confusion.glmnet)
export(coxgrad)
export(coxnet.deviance)
export(cv.glmnet)
export(glmnet)
export(glmnet.control)
export(glmnet.measures)
export(makeX)
export(na.replace)
export(na_sparse_fix)
export(predict.glmnet)
export(predict.relaxed)
export(prepareX)
export(print.cv.glmnet)
export(relax.glmnet)
export(rmult)
export(roc.glmnet)
export(stratifySurv)
import(Matrix)
import(foreach)
import(methods)
importFrom(Matrix,sparse.model.matrix)
importFrom(Rcpp,sourceCpp)
importFrom(grDevices,rainbow)
importFrom(graphics,
  abline,
  axis,
  matplot,
  par,
  plot,
  points,
  segments,
  text
)
importFrom(shape,colorlegend)
importFrom(stats,
  approx,
  as.formula,
  binomial,
  coef,
  contrasts,
  family,
  gaussian,
  glm,
  glm.fit,
  median,
  model.matrix,
  na.pass,
  predict,
  rmultinom,
  rnorm,
  runif,
  weighted.mean
)
importFrom(survival,
  Surv,
  concordance,
  coxph,
  is.Surv,
  strata,
  survfit
)
importFrom(utils,
  modifyList,
  packageDescription
)
useDynLib(glmnet)