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Add unit tests for 15 uncovered functions, coverage 29% -> 50% #29

Add unit tests for 15 uncovered functions, coverage 29% -> 50%

Add unit tests for 15 uncovered functions, coverage 29% -> 50% #29

Triggered via push March 15, 2026 02:53
Status Failure
Total duration 8m 25s
Artifacts 3

rworkflows.yml

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Matrix: rworkflows
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31 errors and 9 warnings
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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[Workflow Telemetry] Error
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[Workflow Telemetry] Unable to report stat collector result
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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[Workflow Telemetry] Error
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
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Process completed with exit code 1.
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AxiosError: Request failed with status code 403
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windows-latest (auto)
AxiosError: Request failed with status code 403
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[Workflow Telemetry] AxiosError
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Process completed with exit code 1.
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[Workflow Telemetry] AxiosError
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macOS-latest (auto)
AxiosError: Request failed with status code 403
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[Workflow Telemetry] AxiosError
macOS-latest (auto)
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"Memory Usage (MB)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"Used","color":"#377eb899","points":[{"x":1773543256320,"y":2985.484375},{"x":1773543261309,"y":2973.390625},{"x":1773543266309,"y":2965.984375},{"x":1773543271310,"y":2934.5625},{"x":1773543276316,"y":2922.25},{"x":1773543281310,"y":2916.9375},{"x":1773543286307,"y":2917.75},{"x":1773543291308,"y":2813.96875},{"x":1773543296311,"y":2825.703125},{"x":1773543301309,"y":2902.78125},{"x":1773543306309,"y":2856.4375},{"x":1773543311309,"y":2811.453125},{"x":1773543316309,"y":2623.6875},{"x":1773543321310,"y":2848.84375},{"x":1773543326305,"y":2836.0625},{"x":1773543331312,"y":2918.8125},{"x":1773543336319,"y":2736.40625},{"x":1773543341310,"y":1641.625},{"x":1773543346308,"y":1703.96875},{"x":1773543351309,"y":1916.453125},{"x":1773543356307,"y":1687.046875},{"x":1773543361309,"y":2286.015625},{"x":1773543366309,"y":2317.859375},{"x":1773543371311,"y":2358.890625},{"x":1773543376307,"y":2419.09375},{"x":1773543381309,"y":2212.640625},{"x":1773543386311,"y":2824.453125},{"x":1773543391310,"y":2824.796875},{"x":1773543396309,"y":2817.484375},{"x":1773543401307,"y":2823.734375},{"x":1773543406311,"y":2824.25},{"x":1773543411307,"y":2795.828125},{"x":1773543416309,"y":2691.84375},{"x":1773543421308,"y":2630.140625},{"x":1773543426308,"y":1579.390625},{"x":1773543431309,"y":1663.09375},{"x":1773543436308,"y":1693.09375},{"x":1773543441308,"y":1711.265625},{"x":1773543446307,"y":1741.921875},{"x":1773543451309,"y":1911.546875},{"x":1773543456308,"y":1999.03125},{"x":1773543461308,"y":1909.171875},{"x":1773543466309,"y":2119.40625},{"x":1773543471307,"y":2136.28125},{"x":1773543476309,"y":2054.5625},{"x":1773543481309,"y":2134.8125},{"x":1773543486312,"y":2115.890625},{"x":1773543491308,"y":2114.65625},{"x":1773543496308,"y":2147.765625},{"x":1773543501307,"y":2164.375},{"x":1773543506308,"y":2257.8125},{"x":1773543511309,"y":2258},{"x":1773543516307,"y":2288.953125},{"x":1773543521307,"y":2270.609375},{"x":1773543526309,"y":2270.453125},{"x":1773543531309,"y":2272.125},{"x":1773543536308,"y":2278.4375},{"x":1773543541308,"y":2261.984375},{"x":1773543546311,"y":2253.703125},{"x":1773543551311,"y":2192.171875},{"x":1773543556309,"y":2192.640625},{"x":1773543561308,"y":2189.859375},{"x":1773543566308,"y":2121.9375},{"x":1773543571308,"y":1895.28125},{"x":1773543576309,"y":1984.109375},{"x":1773543581308,"y":1986.53125},{"x":1773543586308,"y":1986.5625},{"x":1773543591308,"y":1978.828125},{"x":1773543596307,"y":1976.90625},{"x":1773543601313,"y":2039.171875},{"x":1773543606309,"y":1647.9375},{"x":1773543611308,"y":1975.375},{"x":1773543616308,"y":2122.875},{"x":1773543621309,"y":2272.625},{"x":1773543626307,"y":2341.1875},{"x":1773543631309,"y":2330.328125},{"x":1773543636307,"y":2457.453125},{"x":1773543641307,"y":2610.109375},{"x":1773543646309,"y":2682.53125},{"x":1773543651307,"y":2635.703125},{"x":1773543656306,"y":2693.140625},{"x":1773543661312,"y":2641.234375},{"x":1773543666308,"y":2695.015625},{"x":1773543671308,"y":2697.265625},{"x":1773543676311,"y":2730.765625},{"x":1773543681308,"y":2736.71875},{"x":1773543686309,"y":2756.609375},{"x":1773543691309,"y":2774.96875},{"x":1773543696309,"y":2842.5},{"x":1773543701310,"y":2785.203125},{"x":1773543706309,"y":2803.046875},{"x":1773543711314,"y":2792.859375},{"x":1773543716308,"y":2800.078125},{"x":1773543721319,"y":2617.765625},{"x":1773543726309,"y":2761.84375}]},{"label":"Free","color":"#4daf4a99","points":[{"x":1773543256320,"y":4182.515625},{"x":1773543261309,"y":4194.609375},{"x":1773543266309,"y":4202.015625},{"x":1773543271310,"y":4233.421875},{"x":1773543276316,"y":4245.75},{"x":1773543281310,"y":4251.0625},{"x":1773543286307,"y":4250.25},{"x":1773543291308,"y":4354.03125},{"x":1773543296311,"y":4342.296875},{"x":1773543301309,"y":4265.21875},{"x":1773543306309,"y":4311.5625},{"x":1773543311309,"y":4356.546875},{"x":1773543316309,"y":4544.3125},{"x":1773543321310,"y":4319.15625},{"x":
macOS-latest (auto)
AxiosError: Request failed with status code 403
macOS-latest (auto)
[Workflow Telemetry] AxiosError
macOS-latest (auto)
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"CPU Load (%)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"User Load","color":"#e41a1c99","points":[{"x":1773543256320,"y":36.57726659711443},{"x":1773543261309,"y":31.422791638570462},{"x":1773543266309,"y":27.449664429530202},{"x":1773543271310,"y":37.101063829787236},{"x":1773543276316,"y":38.034759358288774},{"x":1773543281310,"y":32.889480692410125},{"x":1773543286307,"y":55.80774365821095},{"x":1773543291308,"y":53.38245144005358},{"x":1773543296311,"y":55.44488711819389},{"x":1773543301309,"y":54.283801874163316},{"x":1773543306309,"y":44.46666666666667},{"x":1773543311309,"y":42.68456375838926},{"x":1773543316309,"y":34.024064171122994},{"x":1773543321310,"y":33.556597454789014},{"x":1773543326305,"y":51.06666666666667},{"x":1773543331312,"y":31.6622691292876},{"x":1773543336319,"y":54.83660130718955},{"x":1773543341310,"y":38.49862258953168},{"x":1773543346308,"y":42.0629604822505},{"x":1773543351309,"y":49.53580901856764},{"x":1773543356307,"y":36.84922244759973},{"x":1773543361309,"y":36.884154460719046},{"x":1773543366309,"y":34.20348058902275},{"x":1773543371311,"y":41.5618795499669},{"x":1773543376307,"y":43.69973190348526},{"x":1773543381309,"y":34.090909090909086},{"x":1773543386311,"y":15.327978580990628},{"x":1773543391310,"y":23.64367046215673},{"x":1773543396309,"y":13.679245283018867},{"x":1773543401307,"y":14.956405097250167},{"x":1773543406311,"y":17.11229946524064},{"x":1773543411307,"y":17.583892617449663},{"x":1773543416309,"y":17.16968477531858},{"x":1773543421308,"y":16.610850636302747},{"x":1773543426308,"y":9.511051574012058},{"x":1773543431309,"y":27.762982689747005},{"x":1773543436308,"y":36.241610738255034},{"x":1773543441308,"y":15.117056856187292},{"x":1773543446307,"y":29.439252336448597},{"x":1773543451309,"y":51.3657561625583},{"x":1773543456308,"y":50.467289719626166},{"x":1773543461308,"y":41.29419613075383},{"x":1773543466309,"y":44.39252336448598},{"x":1773543471307,"y":64.01869158878505},{"x":1773543476309,"y":55.986622073578594},{"x":1773543481309,"y":62.0253164556962},{"x":1773543486312,"y":57.44822979291917},{"x":1773543491308,"y":29.325317301269205},{"x":1773543496308,"y":15.824468085106384},{"x":1773543501307,"y":56.187290969899664},{"x":1773543506308,"y":47.30179880079947},{"x":1773543511309,"y":18.14516129032258},{"x":1773543516307,"y":9.152086137281291},{"x":1773543521307,"y":9.565217391304348},{"x":1773543526309,"y":6.258411843876177},{"x":1773543531309,"y":9.603760913364674},{"x":1773543536308,"y":6.702412868632708},{"x":1773543541308,"y":11.600000000000001},{"x":1773543546311,"y":6.693440428380187},{"x":1773543551311,"y":7.671601615074024},{"x":1773543556309,"y":6.291834002677376},{"x":1773543561308,"y":8.411843876177658},{"x":1773543566308,"y":5.704697986577181},{"x":1773543571308,"y":9.200805910006716},{"x":1773543576309,"y":16.275954454119223},{"x":1773543581308,"y":8.02675585284281},{"x":1773543586308,"y":7.080242751180041},{"x":1773543591308,"y":6.25},{"x":1773543596307,"y":7.997311827956989},{"x":1773543601313,"y":15.086782376502002},{"x":1773543606309,"y":19.30060524546066},{"x":1773543611308,"y":27.751834556370913},{"x":1773543616308,"y":30.12692050768203},{"x":1773543621309,"y":30.58350100603622},{"x":1773543626307,"y":62.75033377837116},{"x":1773543631309,"y":47.96802131912059},{"x":1773543636307,"y":53.20855614973262},{"x":1773543641307,"y":70.88607594936708},{"x":1773543646309,"y":44.800000000000004},{"x":1773543651307,"y":59.66666666666667},{"x":1773543656306,"y":74.96662216288385},{"x":1773543661312,"y":80.47808764940238},{"x":1773543666308,"y":62.03208556149733},{"x":1773543671308,"y":64.48160535117057},{"x":1773543676311,"y":73.15123251165889},{"x":1773543681308,"y":62.04136090727152},{"x":1773543686309,"y":66.37816245006658},{"x":1773543691309,"y":60.46666666666667},{"x":1773543696309,"y":57.26724715338245},{"x":1773543701310,"y":40.60646011865524},{"x":1773543706309,"y":45.729657027572294},{"x":1773543711314,"y":46.82799215173
macOS-latest (auto)
AxiosError: Request failed with status code 403
macOS-latest (auto)
[Workflow Telemetry] AxiosError
macOS-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
R CMD check found WARNINGs
ubuntu-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, actions/upload-artifact@v4, catchpoint/workflow-telemetry-action@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, actions/upload-artifact@v4, catchpoint/workflow-telemetry-action@v2, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows-latest (auto)
'::' or ':::' import not declared from: 'desc'
windows-latest (auto)
dependency 'BiocVersion' is not available
macOS-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, actions/upload-artifact@v4, catchpoint/workflow-telemetry-action@v2, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macOS-latest (auto)
'::' or ':::' import not declared from: ‘desc’
macOS-latest (auto)
dependency ‘BiocVersion’ is not available
macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (auto)
harfbuzz 12.3.2 is already installed and up-to-date. To reinstall 12.3.2, run: brew reinstall harfbuzz

Artifacts

Produced during runtime
Name Size Digest
Linux-biocversion-devel-r-auto-results
1.15 MB
sha256:ffbd1a5cd7290d4038d61c5ab3989f573b3fa78719b7c7c23705fe7b9fe4ac5b
Windows-biocversion-release-r-auto-results
1.17 MB
sha256:dacbe0c8c966d730d2db7a3ed9eadb65d953cc6862cd55a767b55c5293780901
macOS-biocversion-release-r-auto-results
1.17 MB
sha256:a4f82d8ed856e471a115f6dffa352355f5aebfdf71b1ce1d4246627a4c551c6c